21–25 Sept 2026
Paul Scherrer Institut
Europe/Zurich timezone

Impact of Electron Trapping on Coulomb Explosion Imaging of Proteins at XFELs

22 Sept 2026, 11:40
15m
Auditorium (WHGA/001) (Paul Scherrer Institut)

Auditorium (WHGA/001)

Paul Scherrer Institut

Oral AMO Physics Biology

Speaker

Kalyani Chordiya (University of Hamburg)

Description

Understanding the ultrafast response of proteins and large biomolecules to intense X-ray pulses is essential for advancing their structural and dynamical studies. A critical question for larger systems (>1000 atoms) is whether a complete Coulomb explosion can develop before electron trapping suppresses it. In this work, we examine the competitive dynamics between Coulomb explosion and electron trapping by probing the dynamics of the system in space and time using the XMDYN program. Our approach includes several processes such as: the photo-ionization, Auger-Meitner decay, collision-induced secondary ionization, and photofluorescence using the XATOM code. In this work we reveal whether a full Coulomb explosion suitable for imaging a protein can be achieved, or whether electron trapping rapidly suppresses it under realistic XFEL conditions available at the present.

Scientific Topics Imaging

Author

Kalyani Chordiya (University of Hamburg)

Co-authors

Sissi A. Zhao (Department of Physics, University of Hamburg, Hamburg, Germany) Dr Sang-Kil Son (Center for Free‐Electron Laser Science CFEL, Deutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany) Dr Zoltan Jurek (Center for Free‐Electron Laser Science CFEL, Deutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany) Robin Santra (DESY & Universität Hamburg)

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